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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186506220, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRPGFLTD WPWTPLGSFK YLLLAPLVFD SIYSYATIRD HEKLLIVAVT VWRIVHSQIW  60
   61 ISLSRYQTAK GTKRILNKSI EFDQVDRERT WDDQIIFNTL IVYLTKVYVS GTSTIPFWRT 120
  121 DGVILVALLH AGPVEFIYYW FHRALHHHFL YSRYHSHHHS SIVTEPITSV VHPFAEHIGY 180
  181 TLILGLPLIT TFMCGTVSVV SIALYLTYID FMNNMGHCNF ELIPKFLFSL LPPLKFLCYT 240
  241 PSFHSLHHTQ FRTNYSLFMP MYDYIYGTTD ECSDSLYETS LEKEEEKPDA IHLTHLTSLD 300
  301 SIYHLRLGFA SLSSHPLSSR CYLFLMKPFA LILSFILRSF SFQTFVVERN RFRDLTLHSH 360
  361 LLPKFSSHYM SHQQKECINK MIEAAILEAD KKGVKVMSLG LLNQGEELNG YGEMYVRRHP 420
  421 KLKIRIVDGG SLAAEVVLHS IPVGTKEVLF RGQITKVARA IVFSLCQNAI KVPSFSTNGE 480
  481 SETKGFNLDG PFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle