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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18252303
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PCSGEKALMD DNVMKKYTTR SDEARHYVQY DQGEDRWLCT LLLQRGYRVE YSAASDAYTH  60
   61 CPEGFNEFYN QRRRWVPSTI ANIMDLLADA KRTIKINDNI SLLYIFYQMM LMGGTILGPG 120
  121 TIFLMLVGAF VAAFRIDNWT SFHYNIVPIL AFMFICFTCK SNIQLFVAQV LSTAYALIMM 180
  181 AVIVGTALQL GEDGIGSPSA IFLISMVGSF FIAACLHPQE FWCITCGLIY LLSIPSMYLL 240
  241 LILYSIINLN VVSWGTREVV AKKTKKELEA EKKATEEAKK RVKQKSMLSF LQSGIGDNGD 300
  301 EEGSVEFSLA GLFRCIFCTH GKTSDEKQQL TSIAESLDTI KHRMDTIESA VDPHGHHASR 360
  361 HGRRRTTSSG SKDHHLLTSV AEKSGDESDE SDSDTSAEPK QERDFLTNPY WIEDPDVRKG 420
  421 EVDFLSSTEI QFWKDLIDQY LYPIDNDPVE QARIAKDLKE LRDSSVFAFF MINALFVLIV 480
  481 FLLQLNKDNI HVKWPFGVRT NITYDESTQE VHISKEYLQL EPIGLVFVFF FALILIIQFT 540
  541 AMLFHRFGTI SHILASTELN FCKKKSEDLT QDQLIDKHAV EIVKNLQRLQ GIDGDYDNDS 600
  601 GSGPDRIARR KTIQNLEKAR QPRRQIGTLD VAFKKRFLKL TADAENNPAT PILTRRLTMR 660
  661 AETIRALEVR KNSVMAERRK SAMQTLGAKN EYGITTGAPI NNNGALPNQR SGRVSNAGIS 720
  721 IKDVFNVNGG GAEQIYGSNG GGTINQGYEH VIDEDGDGNS LRLTTRNPHP HPHHQVSWGQ 780
  781 NTNGGGGNGT GRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle