YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|531360
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.21
Topology Confidence:	0.26
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLLALVTLAL LFTLSSAQYT LSVSNSASGS KCTTAVSAKL NACNTGCLNS FNIVESSNGK  60
   61 GLVFKTFINA ACSGEYESLS QFTCAANQKI PTTSYIVSCN STPSSNSTTD SDSSSGSTVM 120
  121 IGLASSLLFA FATLLALF

Type	Start	End	Confidence
Signal Peptide	1	17	0.26
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	115	0.52
Transmembrane Helix	116	137	0.84
Cytoplasmic	138	138	0.45