YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6967154
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAMLVVALS GYQVQSYSAK DILADVLMTD LLNRMDKDMQ VGYYDVGNEA AAGSKDNVDL  60
   61 VSRSEYARLC DGGSDCILQS GSASGAASHP SLRDDEFLQH SSLWGHQFIS GGMGEGPNRY 120
  121 PTIVKNDAGL PAYCNPPNPC PEGYDMETQG GSCIVDFENT AIFSREFQAA QDCTCDNEHM 180
  181 FDCSEQDSAD VGGDKGDLNS AVEQYIMQMG QENSLNNVNS LAKKAGYPVM PDPRLDDAVI 240
  241 NPFLQGDRLP IAAKKGNLLF H

Type	Start	End	Confidence
Signal Peptide	1	16	0.79
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	261	0.99