YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42570919
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHATSLSHF LILSSSRFSR LGSLTRLLSK PTSLSGSFSS ISVTGQGFRC CCSVATDDTS  60
   61 PSVKKRVVSG VQPTGSVHLG NYLGAIKNWV ALQDTYETLF IIVDHHAITL PYDTRQLGKA 120
  121 TTDTAALYLA CGIDVSKASV FVQSHVPAHV ELMWLLCSST PIGWLQKMIQ FKEKSRKEGV 180
  181 ENASVGLFTY PDLMTADILL YQSDFVPVGE DQKQHIELAR EIAQRVNHLY GGKKWKKLGG 240
  241 YEIFRGGSLF KIPEPLIPQA GARVMSLTDG LSKMSKSAPS DQSRINLLDS KDLIVDKIKR 300
  301 CKTDSFAGLE FDNAERPECN NLLSIYQIVS GKKKEEVMEE CKDMSWGTFK PLLADALIEH 360
  361 LSPIQARYQE IIAEPEYLDK ILSEGADRAE ELGAVTMRNM YQAMGYYQRR RY

Type	Start	End	Confidence
Signal Peptide	1	22	0.81
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	412	0.96