YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91806252, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFSINPSTL KMIRTSFCIL VVLAISSFSM MEARDLASKG KTNIEYMALN CRKHTAVLTE  60
   61 FGAVGDGKTS NTKAFKEAIT KLAPKAADGG VQLIVPPGKW LTGSFNLTSH FTLFIQKGAT 120
  121 ILASQDESEY PVVAPLPSYG QGRDAAGPTF ASLISGTNLT DVVITGNNGT INGQGKYWWV 180
  181 KYRSGGFKGI TRPYTIEIIF SQNVQISNIT IIDSPAWNIH PVYCNNVIVK GVTILAPIDS 240
  241 PNTDGINPDS CTNTLIEDCY VVSGDDCIAV KSGWDQFGIK VGMPTQQLSI RRLTCISPDS 300
  301 AGIALGSEMS GGIKDVRIED ITLLQTQSAI RIKTAVGRGG YVKDIFARRF TMKTMKYVFW 360
  361 MSGAYNQHPA SGFDPKAMPV ITNINYRDMT ADNVTQPARL DGFKNDPFTK ICMSNIKIDL 420
  421 AAEPKKLLWN CTSISGVSSK VTPKPCSLLP EKGAPVDCAF PVDKIPIESV VLNKCSA

Type	Start	End	Confidence
Signal Peptide	1	33	0.86
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	477	0.99