YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P4H13_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSYGKEKKL VFPYVFIACC FFLAIFGFCF FNLFSQGISF SEIPTTRRSV NDETDSLDHG  60
   61 SSVSNIPFHG LSWNPRVFYL PNFATKQQCE AVIDMAKPKL KPSTLALRKG ETAETTQNYR 120
  121 SLHQHTDEDE SGVLAAIEEK IALATRFPKD YYESFNILRY QLGQKYDSHY DAFHSAEYGP 180
  181 LISQRVVTFL LFLSSVEEGG ETMFPFENGR NMNGRYDYEK CVGLKVKPRQ GDAIFFYNLF 240
  241 PNGTIDQTSL HGSCPVIKGE KWVATKWIRD QTYD

Type	Start	End	Confidence
Cytoplasmic	1	9	0.99
Transmembrane Helix	10	34	0.90
Non-Cytoplasmic	35	274	0.99