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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPLA_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKNVNLKT GDLVTFFSEQ EEEDGYFSKS HDSAVMSNNK SKDCVFKVYP FTQYTARKAL  60
   61 KKKAKRKLQQ QQADGADANN TNSSSGGGNS NNNNNNNSNS SNNNNSSNNN NNNNNNGTTN 120
  121 ANGENVNNEV TDLELKQLEE YQDLEDVSNE STLIQLEGRD LVYGQIVQLY QPSSNQFLFA 180
  181 RNNIVGFRQD GSQKCYFKIT PRFQNQDGCK VFSEDLVLLR HEKTGLFLNQ QNFIIDQGVF 240
  241 GIGLSENGTF WKMAVSDVDG KSGLNILKAN EPFRLFHREG GFVKVSNDKT TFTYNTKTPS 300
  301 SINSLFEIEF ENNNLISPLL RSQKDLQLQQ KDNTDQLQQQ QQKDKDKDNP LKQSYGSLSN 360
  361 SNILLQNNNN NNNNNNSNNN NNSNNNSNNS NGNNSNGNNN NNNSNNIFTS NEVHIGQSFW 420
  421 IRLVGTKKYL SLKESSDDSL KDNPLIVVTE DQKYSPSATF SFVKRDKANE DVIFGSFVRI 480
  481 QSLSKQYLHF ISDETFHHNG ELVGSKKYYK NDDFQIKQIP KSQLEDYGFV LSRINKIQNY 540
  541 LYQSSSNSSS SLMSSINGIG QSSFSSLAGA TTTTTNSGGS NNINNNNNNN NNNNNNNNNN 600
  601 NNNNNNNNID KKRATVQEIK AIIVEFIKFC TQSEVEDPLD REGTPIKTHQ KLLSHPSHLS 660
  661 VLLDYLKRLF EPFDPASILF VYRLLKQMAK SNIKNGIIIN EHLDQISPPS IRDKTIPLHF 720
  721 GAILYEVYKN NNILLEALTE DKVQEFINVI KQKKEPKYME LLSEICICYG KPIVKNQQYL 780
  781 CDLLLEKNSN LLFKTRVIGG SLEIERQNPA PKWVDITAFA LSVDEKTHRY FEQSLALYSN 840
  841 VSKGRNYNGI RLVGQRITHK ECLLALKEES LPYSLRGCYI NILIHVYMDC HPQHYVPQIN 900
  901 YVWNPSIVNN TKTIELLQLY QQYNITGSLH QRNSSIQNPY STVSNGNISI SSNNPISTTN 960
  961 TTTGSGGGGG GSGFMPTVGP SYGQASSPLS NGAIVNSLAS TNLNNQTPTS LNLFNLNSPN1020
 1021 NTTTTTNNST NNTTNNNTNN NNNNNNTNSL ITSTTHLIQL VSPQQNNNSN NNNNNNILNS1080
 1081 IPTSPIVGST NHGQLSHSGS NQTPLYQQQQ QQQQQQQQQN SLSLFREDDI FSTFVNLEIQ1140
 1141 ADKEPSTTTQ LLISLLSKSE YFSNFNNGFP TSHRPQLAFF HKILIAVGYA FKFGFFRKKE1200
 1201 RVLLKRLRYI LEFEHEPVNT FKEVDLGRTM GGSRMLEDES VIYVSIKIEI VNILHLMLSF1260
 1261 QKKNIMDVFL YDFSNMSQSA FSQPENVKNQ LIDRLTTNYQ RDGHQDLSLC TVLFKLLKHE1320
 1321 NNQLSSLSLS LLNRIYKYRS IYAMLWSPIQ KLFLLPNELT PTYKESLQKM ESLTVTCFAP1380
 1381 LTDDSTQESL RSLAFFIHLV TDSDPIKLVK NQKLLHVIGV HKTIIGVLKI GCSLDDLILD1440
 1441 QSQPQHSQQQ QQQHQQQPIN ISGSIDESSS TIPPLTTTTT TTTTTTTTTT TTQQSINFKS1500
 1501 LLNSKTNSQS IHVAKIFRSC YEFLKVFCRD NRENQKVLFG EIEFLIGHLI RYGNVFGTVE1560
 1561 TLIEVFKNNI ELAINFGNSP YLKLLVKFII NLSIDQLDPM FLRLLSVLIL PCNENSVIEN1620
 1621 QISVTNLFKE YKSKISKLLV PISTMKEVMK DPKLLSKHYN VNSSNVYKLH LALQEILNHS1680
 1681 LNDDGAGIGI GTTVIGGSII GGSITTTAQT NINTITNTPT NNNSNNSNNN NTTNNNGTIS1740
 1741 HRHSNSTNTT QSVYPRLIRS SAKAQIVNSS VEILPKEFVI NLELILLLKA CSHGINTPTE1800
 1801 VICREFLSMG ECFDILIVRS DGNGKENSSL MINETKEYLE NNLLFRFKSA YLSFLHEVFF1860
 1861 NSDTLKGDLL ALQLNHDLWS LIDQFTNQLN HLVTICAMNQ MGQLYYVQMA RNIIIPMVSV1920
 1921 LERFYSQCFY FDKATQIHLT YSGRLMASLM KLYWKDPSLT IPFNQQNTSR YQSSLNMSPT1980
 1981 NYDDSDTSEG GYHPILQGLD PEERVNIYSN LVKCLKAMDR SALSPIVPAS VSTINISNVI2040
 2041 KGCEDVINRT EHPNSRNRTE TIDSSNSSPP LILSKSSSIY IDFTRLNNFV KLSKIRGYTE2100
 2101 IAMMVNQSLS ITPFIISHPN YNSNNSNNGN NNNNNNNGGG GNGNGGTIRS NSYISGGGGG2160
 2161 STTKRRTSRN NSNISDISNS GKGGSTISNR FQNSFSNTFI QQQQIGITNQ RHINSGNTNI2220
 2221 VTTVTSKSTN FLEILVFQLR NSLYDNDEMK INCIRILSSL LYINKERKPD IQNIMTDLYC2280
 2281 HSAVIGLLSS KNIEIQFESL SLLLALLDDS VNVDNPLPNP KVKDDIQSHF SSSPDIQFFR2340
 2341 DIYAMIERAK INLRDTKRNI HRIEHVKMGN NTVLGGNLTS KNSIKSSINN GNNSNNNNNR2400
 2401 NGRVIDGCET NPYSTEFQLL QNIFRVLQLL CQGTTNIFKK SIRSQPDNYK SYDILKEMCQ2460
 2461 FLKILETIVN IDSDSIELGL RFFACMKEIV KNTPENQIAV TNVQVCKAVC NILKKTKEND2520
 2521 PSKELKELKY LDLKIEVVDF LLHVIDKEDP RVMSKLIPEL DYKVIESNTQ VISQRSNHET2580
 2581 NEKSIKLASM TFRLIKILAD NDKSHNIQLE DCLLKCGEHC KSRIGRVELL YQNKLERIYF2640
 2641 PIPNYSRRLI LEDKEQSKIK NDENLLQENL EEHFINNKIS WNKATEKIDA FMDYSEYKLI2700
 2701 ELEHLHNLKL NSMSYYLVSH TDKFKFLSFF LALIINLLLI IYSINSPPDL KQFKSDISDD2760
 2761 YGIASWWAGF LPLTILQTIC CILACVGFFL RKGPVLLYQN WVNYLKTHGH KKNFMFYTND2820
 2821 QRMHSLRQTF KYKFIPLNAK FLMTDLKAVY NILAVICSVL GIIYSPYFFA FHIFQFSLNT2880
 2881 KALSLVLKAI TMNKKTLLVM GVFILQAIYL LSIFSFVWFQ EHYKDDDSEY MCGSLLQCFI2940
 2941 TNLYYGVPSQ GQLIQFIKYN FPNNYLNTTD STGSPTLEPI KTSNTVSARI IGWTVFNVAF3000
 3001 YVVISLILLN VILGIIVDTF GQLRDQRAET EDYKSNVCFI CSIERETFQK NSIEFKKHIE3060
 3061 DDHNKWHYLY FFAYLKERCT NNQMNQLSEL ECSIADGITN RSYISFFPIE MSMSLQGIEN3120
 3121 ANRKKEESID QHAKLLDDVE KKITHNISTQ FNQSISLLID EIKNLRQQVS DLKQQQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle