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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6691819
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPPSRPNVT RLSDESVMLR WSVPQNSGLQ ITFFKVQYRM LGDGKNRRKN WQTTSDNIPY  60
   61 GNAHGSGPGQ GNSHWRARNR DREYEMGNPP KNFTSSVTGL TAGKYYRFRI VAVYSNNDNK 120
  121 EGNTSLKFFL QNGTSKSNLP VPELREVETL SESAVVLHWS LVSSTQNEDI DGYYAYYRPA 180
  181 DSAAEYLKAT VDGGMSRSFK IDLLRPGTPY EFKLQSFNSD AASEFSAIRQ ARTRKTHEQP 240
  241 ASSSATPVPA NKAVEQHQNS LYPLIAGAAG GGILLLIASL VVCLCLKRRE NSQPEDENKP 300
  301 QLEHIQADFV TSAVLGVGGH HKSGDVRRLN GVIPRMNITP NPLAQETASD KIRPQIESPM 360
  361 FQNRNVMELR FLPPLANGNG NGNCMARDLA LERSNAEEQQ DEDGHEDEKG LPAVASSSCE 420
  421 TLEACDAAIK LNLPQKHDQE QLDAPNAVLE APSKPLPPLP KKPANGAGQN NSGLHQNGLH 480
  481 HAQPYHPPGT PTLMHKRLDY HQQPPPVPPH SAYYQQAPTH QPSPMMERSV RGHQQPGGFH 540
  541 MEEGTPTPTR IPSLRRQRRT SGNQQVHNSH SNLNIGLSHH NNNNNNLPPH HQHLHHHPGH 600
  601 PGGLVGIPIV PGSPRVQRSP MPSRAMIKRT RLGSHTDNIS SGSLNSIEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle