YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63025160, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVVNSFDLW QKDVFFSAAE EVQKSTDIME SAYRLWIREK KDEICKELQA ALGTAKWQLE  60
   61 EFEKAVRLSH KRCGDNDSSS TRHKQFVTAI ENQIHRVETS LQEAYSENGK KPLRWVDLNE 120
  121 EERDDLAMFL SGSSRTSQSF SGESSIKSRE STNSSLVENV MEVSAKVTFK KAKVYGDGSE 180
  181 CVIDIEERVT PGQAEKSVGL RRIWSSPNFN SLRIIVPGGD NEEEKETLVA QIEATPKVKG 240
  241 TKSVLWMQRL PDHNQLFDKT GCFQNPIRLP FNHPIKFIVS LLLMVFLLLP FVVYLS

Type	Start	End	Confidence
Non-Cytoplasmic	1	272	0.52
Transmembrane Helix	273	295	0.88
Cytoplasmic	296	296	0.51