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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PVIP_NICBE
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPRQQPRP GGLQTSLSLV SPDACGSPNP QERGSTSDQA RDSPSESASS RETWPTSDAL  60
   61 MLKKLEKEKE NGYTEHSVVR NISNSDKMSL RDIARERVDV IAERMRNLPD EYLEKFKHEL 120
  121 RVILEGLGGA QHREEFLFLQ RLVNSRGDLT DGTLIITHRT QLEILVAIKT GIQAFLHPSV 180
  181 SLSQASLIDI FLYKRCRNIA CGSMLPAEEC SCEICAKKNG FCNLCMCVIC YKFDFEVNSC 240
  241 RWIGCDLCSH WTHTDCAISN GQIGTGPSVK NGASSAETLF RCHACSRTSE LLGWVKDVFQ 300
  301 HCAPSWDAEA FVRELDYVRR IFQRSEDARG RKLFWKCEEL IEKLKNGVAD PMACKVILSF 360
  361 FQELDVDPSK SQDNDEGGRL IAPEEAFNKI ADVVQEAIRK MEAVAEEKMR MVKKARLALD 420
  421 ACDQELKDKA REVTSLKMER QRKKQQIDEL ESIVRLKQAE ADMFDLKAGE ARREAERLQR 480
  481 IALAKTEKSE EDYASRYLKQ RLSEAEAEKQ YLFEKIKLQE SSRASQSSAG GNDPSQMMYS 540
  541 KIQDLIKNM

YRC Informatics Platform - Version 3.0
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