YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1658377
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNSLAPMRL KKLLKVFCAS VVLLAATSVV LFFHFGGQII IPIPERTVTL STPPANDTWQ  60
   61 FQQFFNGYLD ALLENNLSYP IPERWNHEVT NVRFFNRIGE LLSESRLQEL IHFSPEFIED 120
  121 TSDKFDNIVE QIPAKWPYEN MYRGDGYVIV GGGRHTFLAL LNINALRRAG NKLPVEVVLP 180
  181 TYDDYEEDFC ENHFPLLNAR CVILEERFGD QVYPRLQLGG YQFKIFAIAA SSFKNCFLLD 240
  241 SDNIPLRKMD KIFSSELYKN KTMITWPDFW LRSTSPHYYH NITKTPIGDK RVRYFNDFYT 300
  301 NPNEYYYGDE DP

Type	Start	End	Confidence
Cytoplasmic	1	15	0.50
Transmembrane Helix	16	36	0.53
Non-Cytoplasmic	37	312	0.99