YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1658331
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSIFLMVVDI GGFCLPPDSG ERVSFKITLL LGYSVFLIIV SDTLPATAIG TPLIGVYFVV  60
   61 CMALLVISLA ETIFIVQLVH KQDLQRPVPD WLRHLVLDRI AWLLCLGEQP MAHRPPATFQ 120
  121 ANKTDDCSAM GNHCSHVGSP QDLEKTSRSR DSPLPPPREA SLAVRGLLQE LSSIRHSLEK 180
  181 RDEMREVARD WLRVGYVLDR LLFRIYLLAV LAYSITLVTL WSIWHYS

Type	Start	End	Confidence
Cytoplasmic	1	26	0.94
Transmembrane Helix	27	49	0.84
Non-Cytoplasmic	50	53	0.81
Transmembrane Helix	54	76	0.92
Cytoplasmic	77	201	0.98
Transmembrane Helix	202	224	0.93
Non-Cytoplasmic	225	227	0.86