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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPTI-PD, CPTI-PC
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHAAVAF SFAITHEGFD INYDHEVLNL VWNSGVRSWK KRLARARNGV RNGVYPAHIQ  60
   61 SLWLISAIAL GLHFAGYQAP FNLTNRILVH LPSNTINWQV TACFLAALVV WLSICFTMRY 120
  121 TLKLLLMYKG WMYESRAPGS RVSLPTMLWV AVVRVLSSWN KPGLYSFQGS LPRLPLPSVK 180
  181 DTMTRYLRSV RPLLDDENYT RMERLAKEFE QTIGKKLQWY LILKSWWSTN YVSDWWEEYV 240
  241 YLRGRSPLCV NSNFYGTDAI FMNLTDKQAA RAANVISLLL NFRRLIEHQE LQPIMVQGMI 300
  301 PLCSWQYERT FNTARVPGLE TDRIIHYRDS NHIVVLHKGC YYKMLIYYKG RILRPCELQV 360
  361 QIEEILKGKA TPVEGEEHLA ALTAWNRSKW AEARNTFFSW GVNQTSLRTI ESAAFVLSLD 420
  421 DEPFEFDLAR PELLDNFGKK LLHGNGYNRW FDKCFTVCVG TNGRVGFNAE HTWSDAAIAS 480
  481 HMWENLIVDD LVSDGYDETG NTKGTPAFQP PTPTRLTWDL KPCLAQIEEA TIDVTKLINE 540
  541 VNLRILVHQD YGKGFMKKCR ISPDAYIQMA LQLAYYRDAG RFSLTYEASM TRLFREGRTE 600
  601 TVRPCTIESS AWVKAMQNPN TTNDERVKMM QAACDRHQLG YQDAMCGRGI DRHLFCLYVV 660
  661 SKYLEVDSPF LNEVLSEPWR LSTSQTPHGQ TPKMDLKKHP NCISAGGGFG PVADDGYGVS 720
  721 YIIAGENLIF FHISAKTTCQ QTDVHRFAQN ISQALSDIRS MFEQHMKDHP KPAKSLTNGK 780
  781 ST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle