YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18074033
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVRRRAVF KNGDCNVVQK HLQRRRVRFL QDMYTTMVDW QWRWTLLAFA LSFILSWLFF  60
   61 ALIWWLIIYT HGDLEEPHLP ENQEESGWAP CVSAIDGFTS CFLFSIETQH TIGYGVRTTS 120
  121 PECPEAIFMM CFQSIYGVMS SAFMAGIVFA KMTRAKQRAQ TLLFSKHAVI CQRDGTLSLM 180
  181 FRVGDMRKSH IIGAGVRAQL IRTKSTKEGE VMTQYFTELE IGTDDSGSDL FFIWPMVIEH 240
  241 KIDENSPLYN LNATDMLQDK FEIVVILEGT VESTGQSTQA RSSYINTEIL WGHRFDPVVL 300
  301 YNKDLQAYEI DYARFNETTQ VDTPLCSARE LNEIYKIQEG FRTPASPSTQ SRCSCSSGYQ 360
  361 TPGRQSRLRW QLSVPL

Type	Start	End	Confidence
Cytoplasmic	1	43	0.82
Transmembrane Helix	44	68	0.89
Non-Cytoplasmic	69	125	0.74
Transmembrane Helix	126	150	0.81
Cytoplasmic	151	376	0.77