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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1850812
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRIAIILVG LASLVASGVI MDRGGRVGLS ANIGLGVQTM QGIRAGVGGG IAGSGVVNTL  60
   61 TRDELLRQKF ILDVLHQVYM PLQQQELLML DDRSQVTNED LYQRPLTQEM HMVLDMLRSQ 120
  121 QMLGKQTICR INNEIHLQQM LGLYRLLVTA RDFDTFKRLV VHARQNINTE MFVNALVLAL 180
  181 GERSDTQMLI VPALYEILAQ IYHKDQVIDE IAHMDTGVSS VRPQLMDVIG MRRQQGLWNS 240
  241 RMQEQQGGLL GVLNRSQLWM PWREFHKQMA WRKMVGGGNV VQQDANQMDK MVIPLPGNGL 300
  301 LSEDVGLKAY VNLLIDELIV NQDVIRNSNR NQRIGMGGVG RDTNERGIWG NRGQINKDDN 360
  361 LGGLGRNRGV NDEDYLSNQQ SNILGGRQGI NSDRLLFVGR RQRVDDDQLN RDSIEGRRLG 420
  421 LDVDELNRHR DINAGRRLGL DNEDDLTGNR DINTGRRHGL DIDIEHAMDR NRVMLGGRRQ 480
  481 GINKAESDIH NIYGGYNNDQ LISGRGLRNR LDLDNGQSVG GRNQQEGQNG INTVSVNDAR 540
  541 LLFVGRRRKN PNNVVDTSGR NNYNDNDEIS GGRRVAKEGK DNKEGRQWNK QQQQDDDENT 600
  601 LYDIRRLNNE RLTNSERYIN VNRRGMMWDQ NNDDEDNLYS NLNRGRNDMN VNSRYQQVNS 660
  661 DVYGQGQGLG RGMGKGRDDF LNVVTRGGLG QRQYYDQDQD LMFNHGNMGQ YNRESLDMHL 720
  721 PTTSINDERL LHINRHKLSN VEEGRRVNSR QGDFDDDEDH SQTGQQRGKY NQAGSRLDEQ 780
  781 SNWQRNSWAM NRQGYQNNRD NDNDNSKRGQ NRGKDNNSGY RYRRSLLNQN QQLDNDNSIS 840
  841 GKLLLHTLQQ LVARLNVERI ALGQPQLIAN NQNNLGRGQL FNNLRGQISL NRNDIQGVDV 900
  901 QTANKIEEII QRIDNVLQQR IGDISVMSYN QKVNEIGLLL AGQIQNIGLI QILAEIQQQG 960
  961 SLQQQQRKGQ VANILENQAA QILLAGIVKV IDNKVQQVYK QREEFISTVH GVTINHVDVD1020
 1021 QLQTYLEHAE IDLSNLLKNN LDQAKEVVGR VPRLNHKNFN IEVDVNSDRQ QQVVVRNLLV1080
 1081 PKVDGLGNII PLQQRRQNVI VLDITTVDLQ PGHNLLTLRS NDITMTARDT TPLTQIYQHV1140
 1141 MQALNGNTRL QQDMLVGQTN KLPHRLLLPR GRINGLPMQL ITVITPVQRS AGIMTLHRGD1200
 1201 GLDTLLLDRL PLNYPLHCDI TDLDRVVSMP NLMVKDVKIY HDDNIKMPLS HLY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle