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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2293383
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSVTPASN TTSLPTSTPS VTTSPPASTD FMLLAAAATS ATSATPATAT SAAATAASNP  60
   61 AKRKLGSIAE IPSKFLVVSD AKGVYSAHTH PNGFAADSLG VDNNETMIKK LMQNLQSQRQ 120
  121 QQSLQQLRSL RPAEISLTPP PAATRKVDIS NSRTRSYSLS NVSAARDQQD HPQHQQHANH 180
  181 MQIQQHYGYM RSNIGGVIYG LHKDSADSAA SSACGAGAGA AAVGMSIASS APAAGSQLSA 240
  241 HHHTGHGGRR RTTSSNSNGA GTREVHNKLE KERRAQLKEC YDLLKKVLPM GDEDRKKTSN 300
  301 LTILDTAHKY VNSLSHEVCE QEAKIEKLAK QKIELQKRLK QLSLRRESPP TDQQIIPQAD 360
  361 KVCLATTATT APPTAASGHN GTTILFDAGN ACATGQQLTT VINKTNGGAT AAASSKHNGN 420
  421 HTGGATTTLT PAMGIMTIKN GNGSNGNMLA ISPTGGHNHQ LHQHHNGSPA GSPSGIGATT 480
  481 GATITRGSPT PSTPSPSPSS SSSGVSLSTS FMGGSSSSSS SSSSSSSSSS SSSSSSPTQQ 540
  541 QQIITPTATA RSVGLKFHGG AGAAVPAGGG SVNGKRGSTR FH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle