YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1613840
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQADKDVK YYTLEEIQKH KDSKSTWVIL HHKVYDLTKF LEEHPGGEEV LREQAGGDAT  60
   61 ENFEDVGHST DARELSKTFI IGELHPDDRS KIAKPSESLI TTVESNSSWW TNWVIPAVSA 120
  121 LAVALMYRLY MGRRLTCFSK PGTGEGLPQR RGEKKPVLIT SADRNLPLKG K

Type	Start	End	Confidence
Non-Cytoplasmic	1	108	0.86
Transmembrane Helix	109	130	0.86
Cytoplasmic	131	171	0.78