YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18043967
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSQELVSCGY VEVTSLPRDA ANILVMGVES SAKEGDPGTI FLFREGAAVF WNVKEKTMKH  60
   61 VMQVLERHET QPYEVALVHW ENEELNYIKT EGQSKLHRGE IKLNSELDLD DAILEKFAFS 120
  121 NALCLSVKLA IWEATLDKFI ESIQSIPEAL KAGKKVKLSH KEVMQKMGEL FALRHRINLS 180
  181 SDFLITPDFY WDRANLEELY DKTCQFLSIT RRVKVMNEKL QHCMELTDLM RNHLNEKRAL 240
  241 RLEWMIVILI TIEVMFELGR VFF

Type	Start	End	Confidence
Cytoplasmic	1	239	0.66
Transmembrane Helix	240	259	0.66
Non-Cytoplasmic	260	263	0.79