YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13543226
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLLRHVG RHCLRAHLNA QLCIRNAAPL GTTAKEEMER FWKKNTSSNR PLSPHLTIYK  60
   61 WSLPMALSVC HRGSGIALSG GVSLFGLSAL VLPGNFESYL MFVKSLCLGP TLIYSAKFVL 120
  121 VFPLMYHSLN GIRHLLWDLG KGLAIPQVWL SGVAVVVLAV LSSGGLAAL

Type	Start	End	Confidence
Cytoplasmic	1	69	0.93
Transmembrane Helix	70	92	0.88
Non-Cytoplasmic	93	105	0.73
Transmembrane Helix	106	127	0.78
Cytoplasmic	128	144	0.71
Transmembrane Helix	145	167	0.88
Non-Cytoplasmic	168	169	0.74