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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148229987, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYGAGRDQY EPAATSEQGG KKKKGKGKDK DMDELKKEVT MEDHKLSLDE LHRKFGTDLQ  60
   61 KGLTTARAAE ILARDGPNSL TPPPTTPEWV KFCRQLFGGF SMLLWIGAIL CFLAYGIQAA 120
  121 MEEEPQNDNL YLGVVLSAVV IITGCFSYYQ EAKSSKIMES FKNMVPQQAL VIRSGEKLSI 180
  181 NAEEVVLGDL VEVKGGDRIP ADLRVISSHG CKVDNSSLTG ESEPQTRSPD FTNDNPLETR 240
  241 NIAFFSTNCV EGTARGIVVN TGDRTVMGRI ATLASGLEGG RTPIAIEIEH FIHIITGVAV 300
  301 FLGVSFFILS LILQYSWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR MARKNCLVKN 360
  361 LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA DTTENQSGAS FDKSSPTWTA 420
  421 LSRIAGLCNR AVFQAGQENT PILKRDVAGD ASESALLKCI ELCCGSVRDM REKNHKVAEI 480
  481 PFNSTNKYQL SVHKNANPSE SRYILVMKGA PERILDRCST IIMQGKEQPL DEELKDAFQN 540
  541 AYLELGGLGE RVLGFCHLTL PDDQFPDGFQ FDTEEVNFPT ENLCFVGLIS MIDPPRAAVP 600
  601 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI PVNQVNPRDA 660
  661 KACVIHGTDL KDMTQEQIDD ILTHHTEIVF ARTSPQQKLI IVEGCQRQGA IVAVTGDGVN 720
  721 DSPALKKADI GIAMGIAGSD VSKQAADMIL LDDNFASIVT GVEEGRLIFD NLKKSIAYTL 780
  781 TSNIPEITPF LIFIIANIPL PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPK 840
  841 TDKLVNERLI SMAYGQIGMI QALGGFFTYF VILAENGFLP WTLLGIRVNW DDRWTNDVED 900
  901 SYGQQWTYEQ RKIVEFTCHT SFFVSIVVVQ WADLIICKTR RNSVFQQGMK NKILIFGLFE 960
  961 ETALAAFLSY CPGMDVALRM YPLKPTWWFC AFPYSLLIFI YDEVRKLIIR RSPGGWVEKE1020
 1021 TYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle