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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4163997
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AFSLSLLLAL ILCFSPTQSY KTIGKGYRLV SIEESPDGGF IGYLQVKQKN KIYGSDITTL  60
   61 RLFVKHETDS RLRVHITDAK QQRWEVPYNL LPREQPPQVG KVIGKSRKSP ITVQEISGSE 120
  121 LIFSYTTDPF TFAVKRRSNH ETLFNTTSSL VFKDQYLEIS TSLPKEASLY GLGENSQANG 180
  181 IKLVPNEPYT LYTEDVSAIN LNTDLYGSHP MYMDLRNVGG KAYAHAVLLL NSNGMDVFYR 240
  241 GDSLTYKVIG GVFDFYFIAG PSPLNVVDQY TQLIGRPAPM PYWSLGFHQC RWGYHNLSVV 300
  301 EDVVDNYKKA KIPLDVIWND DDHMDGHKDF TLNPVAYPRA KLLAFLDKIH KIGMKYIVIN 360
  361 DPGIGVNASY GTFQRAMAAD VFIKYEGKPF LAQVWPGPVY FPDFLNPKTV SWWGDEIKRF 420
  421 HDLVPIDGLW IDMNEVSNFC SGLCTIPEGK QCPSGEGPGW VCCLDCKNIT KTRWDDPPYK 480
  481 INATGVVAPV GFKTIATSAT HYNGVREYDA HSIYGFSETI ATHKGLLNVQ GKRPFILSRS 540
  541 TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFYP QPTEELCNRW 600
  601 IEVGAFYPFS RDHANYYSPR QELYQWDTVA DSARNALGMR YKILPFLYTL NYEAHMTGAP 660
  661 IARPLFFSFP EYTECYGNSR QFLLGSSFMI SPVLEQGKTE VEALFPPGSW YHMFDMTQAV 720
  721 VSKNGKRVTL PAPLNFVNVH LYQNTILPTQ QGGLISKDAR TTPFSLVIAF PAGASEGYAT 780
  781 GKLYLDEDEL PEMKLGNGQS TYVDFYASVG NGTMKMWSQV KEGKFALSKG WVIEKVSVLG 840
  841 LRGAGQVSEI QINGSPMTKK IEVSSKEHTY VIGLEDEEEN KSVMVEVRGL EMLVGKDFNM 900
  901 SWKMGIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle