YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26345818
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.31
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNTSTTTT ATVARSISSF TDPHHFPSHN HIIRMASASQ GHFDAYEALD LTEFAKKQPW  60
   61 WRKLFGQESR SAGEKYSVAT QLHIGGVTGW CTGFIFQKVG KLAATAVGGG FFLLQLANHT 120
  121 GYIKVDWSRV EKDMKKAKEQ LTIRKSAQIP TEVKSKAEEV VCFVKKNVLV TGGFFGGFLL 180
  181 GMAS

Type	Start	End	Confidence
Cytoplasmic	1	78	0.52
Transmembrane Helix	79	96	0.31
Non-Cytoplasmic	97	184	0.49