YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41394381
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVALVSA SALKNSAPMS ASMLNVCRGF HTGQPALAPV PPLPEKGGKV RFGLIPEEFF  60
   61 QFLYPKTGVT GPYMFGTGLL VYILSKEIYV INHETFAAAC IAICLFYGIK KFGPSVAAFA 120
  121 DELNNEKVAK AQAVKDSAIK NLERAIEEET KEQWRVEGRN NLFDAKRNNI AMLLEINYRE 180
  181 RLLNVYNEVK KRLDYQVGLQ HLQRRKEQDH MISWVESNVR QSITPQQQKE SIAKCISDLK 240
  241 LLSKSAQATA

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	250	0.97