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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28277278, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.73
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSAVFFLC FVAAIAVSSR AQDLVNEDVK RTVDLSSHLA KVTAEVTISN PGPGAVHSFL  60
   61 VALEPELGSH LAYLGVKGED QEEGTLEIQE TKVKGKSGLQ YMVHFGSSLA PGAKTKVTVE 120
  121 TVFTHVLQPY PTQITQAEKQ FVTFEGSHYF YSPYPTKSQT TRVKLASRNV ETYTKLGNPT 180
  181 RSEDLIEYGP FKDIAAWSQD PLKVHYENNS PFLTITSMTR LIEVSHWGNI AVEETVDLKH 240
  241 TGAYLKGPFS RYDYQRQTDS GISSVKSFKT ILPASAQDVY YRDEIGNIST SHLLILDDSV 300
  301 EMEIRPRFPL FGGWKTHYMI GYNLPSYEYL YNLGDQYALK MRFIDHVFDD QVVDSLTVKI 360
  361 ILPEGAKNLQ VDNPYEINRA PDELHYTYLD TFGRTVIIAH KNNLVEQHIQ DIVVHYSFNK 420
  421 ILMLQEPLLV VGAFYILFFT VILYVRLDFS ITKDPAAEAK MKAACITEQI LTLVNKRLGL 480
  481 YRHFDEAVNK YKLSRDISTL NSGKKTLETE HKNLTNEIAS LQSKLKAEGS DLCDKVAEIQ 540
  541 KLDAQVKEIV LKSSSDAERL VSGKLKKESY IENEKQHSSR RQELVNKIDN ILVGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle