YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7441307, gi\|3...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACKTLTCSA ASPLVVNGVT ASSRSNNRVA APFSVFFPST CNVKRPASRL VVEATGDNKD  60
   61 TSVDVHVSSG QGGNNNQGST SVDRRPRKMS LDVSPFGLLD PMSPMRTMRQ MMDTMDRLLE 120
  121 DTMTFPGRNR SSAVGEIRAP WDIKDDENEI KMRFDMPGLS KDEVKVSVED DLLVIKGEYK 180
  181 KEETGDDNSW GRNYSSYDTR LSLPDNVEKD KIKAELKNGV LFISIPKTKV EKKVIDVQIN 240
  241

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	240	0.99