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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32067
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSWFILVLL GSGLICVSAN NATTVAPSVG ITRLINSSTA EPVKEEAKTS NPTSSLTSLS  60
   61 VAPTFSPNIT LGPTYLTTVN SSDSDNGTTR TASTNSIGIT ISPNGTWLPD NQFTDARTEP 120
  121 WPGNSSTAAT TPETFPPSDE TPIIAVMVAL SSLLVIVFII IVLYMLRFKK YKQAGSHSNS 180
  181 FRLSNGRTED VEPQSVPLLA RSPSTNRKYP PLPVDKLEEE INRRMADDNK LFREEFNALP 240
  241 ACPIQATCEA ASKEENKEKN RYVNILPYDH SRVHLTPVEG VPDSDYINAS FINGYQEKNK 300
  301 FIAAQGPKEE TVNDFWRMIW EQNTATIVMV TNLKERKECK CAQYWPDQGC WTYGNIRVSV 360
  361 EDVTVLVDYT VRKFCIQQVG DMTNRKPQRL ITQFHFTSWP DFGVPFTPIG MLKFLKKVKA 420
  421 CNPQYAGAIV VHCSAGVGRT GTFVVIDAML DMMHTERKVD VYGFVSRIRA QRCQMVQTDM 480
  481 QYVFIYQALL EHYLYGDTEL EVTSLETHLQ KIYNKIPGTS NNGLEEEFKK LTSIKIQNDK 540
  541 MRTGNLPANM KKNRVLQIIP YEFNRVIIPV KRGEENTDYV NASFIDGYRQ KDSYIASQGP 600
  601 LLHTIEDFWR MIWEWKSCSI VMLTELEERG QEKCAQYWPS DGLVSYGDIT VELKKEEECE 660
  661 SYTVRDLLVT NTRENKSRQI RQFHFHGWPE VGIPSDGKGM ISIIAAVQKQ QQQSGNHPIT 720
  721 VHCSAGAGRT GTFCALSTVL ERVKAEGILD VFQTVKSLRL QRPHMVQTLE QYEFCYKVVQ 780
  781 EYIDAFSDYA NFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle