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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39794724, gi|...
Protein type: Transmembrane
Type Confidence: 0.44
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFNKGRVSS AFLISWMYFV YISSGLETTI DPTAESITLS DIIGNATEWM MDFTDIESKF  60
   61 SFRTLEEPED DLCYIVPGQP QSIKDCNFNT ETKTFIVIHG WTVTGMFESW VPKLVTALYE 120
  121 REPSANVIVV DWLSRAQQHY PTSASYTKLV GKDVAKFVNW LQAEIDYPWE KLHLLGYSLG 180
  181 AHVAGIAGLL TKHKVNRITG MDPAGPTFEY ADSLSTLSPD DANFVDVLHT NTRGSPDRSI 240
  241 GIQRPVGHID IYPNGGTFQP GCDLQNTMLM VATTGLRNMD QIVKCSHERS IHLFIDSLVN 300
  301 QDHESMAFRC SSRDSFNKGM CLSCRKNRCN KVGYAVNKIR TRRSSKMYMK TREMMPYKVF 360
  361 HYQVKVHFFG KTQLSYTDQP MKISLYGIHG EKENIPYIMP TLNTNSTVSF LLTTDADIGE 420
  421 LLMVKLLWEK DTLISWPWWN SDTFHIRKLR IKSGETQSKI IFSAKESEFS YLSRGGEAAV 480
  481 FVKDKEAQSS RKNQRLHKMK MHGSSFKQNN E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle