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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37805183, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLFLERFP WPSLRTYTGL SGLLLGLSLI SAYRSLSGEA AERSMLKGEG AGDQLSAEPV  60
   61 DFVELFRYLV SDSLGVWVLV NTVCCLLMLI AKLIQYVVFG PLRVGERQHL KDKFWNFIFY 120
  121 KFIFIFGVLN VQTVEEVVLW FLWFAGLLFL HLMVQLCKDR FEYLSFSPTT PMSCHVRVLV 180
  181 LLNVMLLVCC GLAVLCAVAG YTHGMHTLAF MAAECMLVTT RTTHVVLRYV IHLWDLNHEG 240
  241 TWEGKGTYVY YTDFVMELSH LSLDLMHHIH MLLFGNIWLS MASLVIFMQL RHLFHEFQRR 300
  301 IRRHKNYLRV VGNMEAHFAV ATPEELEANS DDCAICWDSM QSARKLPCGH LFHNSCLRSW 360
  361 LEQDTSCPTC RMSLNMSDGT RTRVEQQRDN VEQNVIPLTV TEGRPRLNHH NHFFHFDGSR 420
  421 FASWLPSFSV EVMHTTNLLG LAQANNSQLN TMARQVLDMF PQVPYNLVLQ DLQLTRSVEI 480
  481 TTDNILEGRI QVPFPTQHQE DVISATEISQ EGIAQEESSA TSQTERVNLD LSPGLEEFED 540
  541 FSGIEAQMSE AEDFEARGSR FSKSAEERQR MLVQRKDDLV QLARRRFLNR TSEEDNPDCS 600
  601 SERDSFTDIS SDSTTMRRRM LAAAAERRIQ MQQSPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle