YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29351641
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLPVTMVLLT MIARVADGLP LAASMQEDEQ SGRDLQQYQN QAKQLFRKLN EQSPTRCTLE  60
   61 AGAMTFHYLI EKGVCYLVLC EAAFPKKLAF AYLDDLFAEF DEQHGKKVPT VSRPYSFIEF 120
  121 DNYIQKTKKS YIDSRARRNL SSVNTELQDV QRIMVANIEE VLQRGEALSA LDSKASNLSS 180
  181 LSKKYRQDAK YLNMRSTYAK LAAVAVFSVM LIVYIRFWWL

Type	Start	End	Confidence
Cytoplasmic	1	195	0.92
Transmembrane Helix	196	218	0.89
Non-Cytoplasmic	219	220	0.83