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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1561774
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLNSSSFL SNSGFSGISR SVSQRKVLPP VVLALGSNGR AGELNVSAVM ESTLKELRDG  60
   61 NTVLEVDSKS AVSGGVRDVQ GEDAATEDQI VTPWTITVAS GYSLLRNPHH NKGLAFTEKE 120
  121 RDHHYLRGLL PPAVVSQDLQ VKKLMANIRQ YTVPLQKYMA MMDLQERNEK LFYKLLMDNV 180
  181 EELLPVVYTP TVGEACQKYG GILRRPQGLF ISLNEKGKIL EVLKNWPEKN IQVIVVTDGE 240
  241 RILGLGDLGC QGMGIPVGKL SLYTALGGVR PSACLPVTID VGTNNQKLLD DEFYIGLRQK 300
  301 RATGQEYAEL IHEFMCAVKQ NYGEKVLVQF EDFANHNAFD LLARYGTTHL VFNDDIQGTA 360
  361 SVVLAGLISA LNLVGGTLAE HTFLFLGAGE AGTGIAELIA LEMSKQTQAP LEETRKKIWL 420
  421 VDSKGLIVSS RMDSLQHFKK PWAHEHEPIK NLVDAVKAIK PTVLIGSSGV GRTFTKEVVE 480
  481 AMASFNEKPI ILALSNPTSQ SECTAEEAYT WSEGRAIFAS GSPFDPVEYN GKVFVPGQSN 540
  541 NAYIFPGFGL GLIISGAIRV HDDMLLAASE ALAKQATQEN FDKGMIYPPF SNIRKISAHI 600
  601 AANVAAKAYE LGLATRLPQP ENLVEYAENC MYSPAYRSFR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle