YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1209835
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METVSTNIAS VTQEQIYKEF IRLGMEQLIA QDLSKRYYHN ELTYRDLENL EKQFDIKFDN  60
   61 LIFKIDSVEK NLQKDISNLD VKIDTVEKNL NAKIDSLDTK IDTVEKNLNL KIDSVEKNLN 120
  121 AKIDSLDTKI DTVEKNLQKD ISNLDTKIDS VEKNLNAKID NVEKNLNLKI DGLDIKIDNV 180
  181 EKNLCLFEML KWVLGIMGAM SITMIAGLIF AFISK

Type	Start	End	Confidence
Cytoplasmic	1	191	0.80
Transmembrane Helix	192	213	0.95
Non-Cytoplasmic	214	215	0.70