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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|896313
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADALIDSQV PAKSGGAGML KKSFPGLSFL DNLSEMTMLR QIGLLVGLAA SVAIGFAVVL  60
   61 WSQQPDYKPL YGSLNGVDAN RVVEALTAAD IPYKVEPNSG ALLVKADDLG RARMKVASAG 120
  121 VAPTDNNVGF EILDKEQALG TSQFMEATNY RRGLEGELAR TVSSLNNVKA ARVHLAIPKS 180
  181 SVFVRDDRKP SASVLVELYP GRSLEPSQVM AIVNLVATSV PELDKSQVTV VDQKGNLLSD 240
  241 QQELSELTMA DKQFDFTRRM EGLLTQRVHN ILQPVLDNGR NKTEVSADVD FSAVESTSEM 300
  301 YNPDQPALRS EQHNNEERQN SSGPQGVPGA LSNQPPGPAS APQQATASAP ADYVAPGQPL 360
  361 KDANGQTIID PKTGKPELAP YPTDKRDQTT RNYELDRSIS YTKQQQGRLR RLSVAVVLDD 420
  421 QMKVDAKTGE VSHQPWSADE LARFTRLVQD SVGYDASRGD SVSVINAPFA PAQAEEIDSI 480
  481 PFYSQPWFWD IVKQVLGVLF ILVLMFGVLR PVLSNITGGG KGKSLAGGGG GRDGDLALGE 540
  541 SGLEGSLADD RVSIGGPSSI LLPSPTEGYD AQLNAIKNLV AQDPGRVAQV VKEWINADE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle