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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55584156
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPNAKSETD AKPEAEPAPA SEPAADLESV DQKLEETHHS KFREVDRQEQ EVLAEKAAEA  60
   61 ASQRIAQVES TTRSATTEAQ ESTTTAVPVI KKIEHVGEVV TEVIAERTGL PTWGVVAIII 120
  121 LVFLVVFGII FFCVRRFLKK RRTKDGKGKK GVDMKSVQLL GSAYKEKVQP DMEELTENAE 180
  181 EGDEEDKQSE QKLGRLNFKL EYDFNSNSLA VTVIQAEELP ALDMGGTSDP YVKVYLLPDK 240
  241 KKKFETKVHR KTLSPVFNET FTFKSLPYAD AMNKTLVFAI FDFDRFSKHD QIGEVKVPLC 300
  301 TIDLAQTIEE WRDLVSVEGE GGQEKLGDIC FSLRYVPTAG KLTVVILEAK NLKKMDVGGL 360
  361 SDPYVKIAIM QNGKRLKKKK TSVKKCTLNP YYNESFSFEV PFEQMQKICL VVTVVDYDRI 420
  421 GTSEPIGRCI LGCMGTGTEL RHWSDMLASP RRPIAQWHTL KDPEETDEIL KNMK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle