YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG33635-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLKSDLDE YLLLQSDQKK PSFNVKLPQL KVPFFSSSDP EANSFLKDSD SCFPKLSRLQ  60
   61 RIVGFVACLG MGALCMTLST FYIPFLILKA RKFALLYTLG SLFFILSFCF LSGFGSFLKQ 120
  121 MFSKPRLLTS LSYSSCLILT LYCALVAKST AFTVLFAVAQ IIALLFMVLG TVPGGATGLK 180
  181 FFGQLFKNTV SASTSVLPV

Type	Start	End	Confidence
Cytoplasmic	1	62	0.96
Transmembrane Helix	63	86	0.92
Non-Cytoplasmic	87	93	0.85
Transmembrane Helix	94	118	0.89
Cytoplasmic	119	126	0.90
Transmembrane Helix	127	148	0.85
Non-Cytoplasmic	149	155	0.59
Transmembrane Helix	156	179	0.85
Cytoplasmic	180	199	0.87