YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1245188
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFYPERAIIF LSGCYTMVSI AYIAGFLLED KVVCNEQFEN EFRTVVQGTK KEGCTILFMM  60
   61 LYFFSMSSSI WWVILALTWF LAAGMKWGHE AIEANSQYFH LAAWAVPAIK TITILAVGQV 120
  121 DGDVLSGVCF VGINSVDALR GFVLAPLFVY LFIGTSFLLA GFVSLFRIRT IMKHDGTKTE 180
  181 KLEKL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.92
Transmembrane Helix	7	28	0.87
Non-Cytoplasmic	29	62	0.86
Transmembrane Helix	63	87	0.78
Cytoplasmic	88	97	0.81
Transmembrane Helix	98	118	0.83
Non-Cytoplasmic	119	143	0.86
Transmembrane Helix	144	166	0.89
Cytoplasmic	167	185	0.93