YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215003, gi\|539470
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNMYLLKLFL AILMLAAFTG TADGYYDYTK YECIYSTSDY SDMVFLQSYS FNKIVDVKCN  60
   61 SQEVKCVGYT EQGVKFAENF NKDQAILQQL KAAVDTFCRH NAEIFDSAVR DKAVKPKVTM 120
  121 KSVKQAEGRH PAMLLCSAYE FYPKKIKMYW LRDSKVITSD VTSTMEMANG NWYYQIHSHL 180
  181 EYTPKNGEKI QCVVEHASST QPITKEWNPH ISESDRNKFA IGASGLVLGI IIAIAGLIYY 240
  241 KKKSTGRILV PN

Type	Start	End	Confidence
Non-Cytoplasmic	1	218	0.84
Transmembrane Helix	219	240	0.95
Cytoplasmic	241	252	0.86