YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|205436, gi\|21...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIPEVTVLPK SPVNLGEPNI LICFIDKFSP PAVNVTWLRN GQPVTKGVSE TVFLPREDHL  60
   61 FRKFHYLTFL PSVEDYYDCE VDHWGLEEPL RKHWEFEEKT LLPETKENVL CVLGLFVGLV 120
  121 GIVVGIVLII KGLRKRNAVE RQGAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	108	0.66
Transmembrane Helix	109	132	0.89
Cytoplasmic	133	145	0.63