YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|205449, gi\|21...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WMEREGPDYW ERETQKAKGN EQNYRVSLRN LRGYYNQSEG GSHTIQRMYG CDVGTDGSLL  60
   61 RGYRQDAYDG RDYIALNEDL KTWTAADFAA QITRNKWDRA GVAERLRAYL EGTCVEWLRR 120
  121 YLEHGKETLL RLDPPKAHVT LHPRPEGDVT LRCWALGFYP ADISLSWQLN GEDLTQDMEL 180
  181 VETRPAGDGT FQKWASVVVP LGKEQNYTCR VEHEGLPEPL TQRWEPSLST DSNMETYVIY 240
  241 VVLGAVAIIA AVIIAAVVAV VRRRRKRNTG GKGDYTPAPG RDSSQSSDVS LPDCKA

Type	Start	End	Confidence
Non-Cytoplasmic	1	236	0.97
Transmembrane Helix	237	260	0.95
Cytoplasmic	261	296	0.97