YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|205445, gi\|21...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAERLRAYLE GTCVEWLRRY LEHGKETLLR LDPPKAHVTL HPRPEGDVTL RCWALGFYPA  60
   61 DISLSWQLNG EDLTQDMELV ETRPAGDGTF QKWASVVVPL GKEQNYTCRV EHEGLPEPLT 120
  121 QRWEPSLSTD SNMETYVIYV VLGAVAIIAA VIIAAVVAVV RRRRKRNTGG KGDYTPAPA

Type	Start	End	Confidence
Non-Cytoplasmic	1	135	0.92
Transmembrane Helix	136	160	0.92
Cytoplasmic	161	179	0.95