YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1372988, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASRALSLI GKRAISTSVC LRAHGSVVKS EDYAFPTYAD RRDYPLPDVA HVTMLSASQK  60
   61 ALKEKEKADW SSLSRDEKVQ LYRIQFNESF AEMNRGTNEW KTVVGMAMFF IGFTALVLIW 120
  121 EKSYVYGPIP HTFDRDWVAI ETKRMLDMKA NPIQGFSAKW DYDKNEWKK

Type	Start	End	Confidence
Cytoplasmic	1	99	0.59
Transmembrane Helix	100	120	0.64
Non-Cytoplasmic	121	169	0.88