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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|227163523, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTPTTLSSA NRLSLPVEGM TCASCVGRVE RALKAVPEIK DAVVNLATER ADITFSSTPN  60
   61 PVLAVSAIES SGYKVPEEIT ELAIEEMTCA SCVGRVEKAL AQIPGVLEAT VNLATERARV 120
  121 RHLSGVVSIT DLEVAVVHAG YKPRRLSDNP ANTRDLSEER REKEARSLRR ALLIATIFTL 180
  181 PVFVIEMGSH FIPGVHHWVT QTLGQQLNWY IQFVLATIVM FGPGLRFFKK GIPALLRGAP 240
  241 DMNSLVSVGT VAAYGYSVVS TFIPQVLPAG TANIYFEAAV VIVTLILLGR NLEAKAKGNT 300
  301 SQAIKRLVGL QAKTARVSRH GEILEIPLDQ VMMGDIVVVR PGEKIPVDGE VVEGHSYVDE 360
  361 SMITGEPVPV AKEIGAEVVG GTINKTGTFS FKVTKVGANT ILAQIIRLVE EAQGSKLPIQ 420
  421 ALVDKVTMWF VPAVMIGATI TFFIWLAFGP EPALTFALIN AVAVLIIACP CAMGLATPTS 480
  481 IMVGTGRAAE LGILFRKGEA LQALRDVSVV ALDKTGTLTK GRPELTDLIP AEKFEYNEIL 540
  541 SLVASIETYS EHPIAQSIVN AANEAKLTLA SVDNFEAIPG FGVSATVDGR SVSVGADRFM 600
  601 KQLGLDVSQF ASSAQKLGEQ GKTPLYTAID GRLAAIIAVA DPIKETTPEA IKALHALGLK 660
  661 VAMITGDNKA TAKAIAKQLG IDEIVAEVLP DGKVAALKQL SQKGDKVAFV GDGINDAPAL 720
  721 AQADVGLAIG TGTDVAIEAA DVVLMSGDLR GVVDAIALSQ ATIRNIKQNL FWTFAYNALL 780
  781 IPVAAGMLYP INGMLLSPIF AAAAMALSSV FVLGNALRLK RFQAPMKTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle