YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41323976
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRFTSLILS SPLVFFLQVS LILATNAHSL SYIAKDSIIE IGIGREREEV MLKEESGGSG  60
   61 GVVNNWARVC DTCRAAACTV YCRADSAYLC AGCDARVHAA NRVASRHERV RVCEACERAP 120
  121 AALLCKADAA SLCTACDADI HSANPLARRH QRVPILPISG YLYGTQVGPA AGETEDQFMT 180
  181 QEGEETIGEE DEDEAASWLL LNPAKNSNNQ NNNGFLFGGE VDEYLDIVEY NSCAENQYSD 240
  241 QYNQQHYSVP PKSCGGDSVV PIQYGEGKDH QQQQQQQYHN FQLGLEYEPA KAAYSYDGSV 300
  301 SQGVSMSSMD VGVVPESAMS EISISHQSAS RGTIDLFSSP PIQMPSQLSP MEREARVLRY 360
  361 REKKKARKFE KTIRYASRKA YAETRPRIKG RFAKRTDVDV EVDQMFSSTL MAETAYGIVP 420
  421 SF

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	422	0.99