YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|461407
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRDALLTSTI NCVTSFISGF AIFSILGYMA HEHKVKIEDV ATEGAGLVFV LYPEAISTLS  60
   61 GSTFWAVLFF LMLLALGLDS SMGGMEAVIT GLADDFQVLK RHRKLFTCAV TLGTFLLAMF 120
  121 CITKGGIYVL TLLDTFAAGT SILFAVLMEA IGVSWFY

Type	Start	End	Confidence
Cytoplasmic	1	8	0.79
Transmembrane Helix	9	30	0.89
Non-Cytoplasmic	31	54	0.85
Transmembrane Helix	55	78	0.78
Cytoplasmic	79	104	0.83
Transmembrane Helix	105	127	0.90
Non-Cytoplasmic	128	134	0.73
Transmembrane Helix	135	156	0.90
Cytoplasmic	157	157	0.97