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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|808821, gi|23...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEEAYSCTV DDILKHYNTN TETGLTKRQI ESSLKEYGYN ELPPEENKPL WKLVLGQFDD  60
   61 LLVKILLLAA IISFVLAWFE DSEDATTAFV EPVVIMLILI VNAIVGVWQE RNAESAIEAL 120
  121 KEYESDTAKV VRQGYQGVQS VKARELVPGD IVEVAVGDRV PADIRIVKIL STTLLIDQSI 180
  181 LTGESVSVSK HSDPISQARA VNQDKKNMLF SGTNVASGKC VGIVVGTGLS TEIGKIRDQI 240
  241 MHTEQDKTPL GQKIDEFGTQ LSKVITFICI AVWCINIGHF NDPVHGGSWL RGAVYYFKIA 300
  301 VALAVAAIPE GLPAVITTCL ALGTRRMARK NAIVRSLPSV ETLGCTTVIC SDKTGTLTTN 360
  361 QMTVCRMFTF GNESRIGDAL QLKFDEFEIT GSKYAPEGNV HHQGRKVDCS EYPCLVELAQ 420
  421 ICSLCNDSSM EYNESRHAYE KVGEATETAL VCLVEKMNVT KVSKSNLTNH QLAMVCNRDI 480
  481 QKMFERKFTL EFSRDRKSMS TYVIPQSQIS GSKEKLFVKG APESILDRCT YVRTAGGKLL 540
  541 LTSELKGEVL RKIATYATGR ETLRCLALAT RDEPPSHFDL KDPKNFKDYE TELTLVGVVG 600
  601 MVDPPRCEVA SSIQACKKAG IRVIVITGDN KATAEAICRR IGLFEDKEDT SGKSFTGREF 660
  661 DDLSLEKKKD AVRNGKLFAR VEPAHKSLIV QFLQQDGEIS AMTGDGVNDA PALKKAEIGI 720
  721 AMGSGTAVAK SASDMVLADD NFSTIVAAVE EGRAIYDNMK QFIRYLISSN IGEVVCIFLT 780
  781 AALGMPEALI PVQLLWVNLV TDGLPATALG FNPPDVDIMT KPPRKSKEPL ISGWLFLRYM 840
  841 LIGIYVGCAT VGAAAWWFMV YEGGPKVNYY QLTHHLQCQL EPSAFKGVNC SVFASPKPMT 900
  901 MALSVLVLIE MFNALNSLSE NQSLVVMPPW HNMWLIAAIC FSMTLHFAIL YINVLANIFQ 960
  961 IAALNIAEWF AVLKISIPVL LLDETQKAIV RSSQRGHSPL YHMAIPMVMW CVYSAFLAFN1020
 1021 PL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle