YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61557316, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNMRKRTLK YLTFFLLFIF LTSFVLNYSN SGVPSAWFPK QMVLEFSENF RKFIKSQPCT  60
   61 CRHCISQGKV SYWFDQRFNK TMQPLLTVHN ALMEEDTYRW WLRLQRERKP NNLSDTVKEL 120
  121 FRLVPGNVDP MLNKRLVGCR RCAVVGNSGN LKDSSYGPEI DSHDFVLRMN RAPTVGFEAD 180
  181 VGSRTTHHLV YPESFRELGE NVNMVLVPFK ITDLQWVISA TTTGTITHTY VPVPPKIKVK 240
  241 QEKILIYHPA FIKYVFDNWL QGHGRYPSTG ILSVIFSIHI CDEVDLYGFG ADSKGNWHHY 300
  301 WENNPSAGAF RKTGVHDGDF EYNVTTTLAA INKIRIFKGR

Type	Start	End	Confidence
Signal Peptide	1	31	0.58
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	340	0.99