YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2118526
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPGTAAAA LLPAVLLAVL APWAGRGGAA PTAPNGTLEA ELERRWESLV ARSLLAGLPV  60
   61 AAQPKEAAVQ SGAGDYLLGI KRLRRLYCNV GIGFHLQVLP DGRIGGVHAD TSDGLLELSP 120
  121 VERGVVSIFG VASRFFVAMS SRGRLYGSPF FTDECRFREI LLPNNYNAYE CDRHPGMFIA 180
  181 LSKNGKAKKG NRVSPTMKVT HFLPRL

Type	Start	End	Confidence
Signal Peptide	1	29	0.94
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	206	0.99