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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41209144
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDPTYPLFP TFAFLGFVLA LVPLPWHLQA WNSGTCFFMV WTALGCLNQF VNSIVWKDNA  60
   61 INSAPIWCEI SIRITMGLSV GLPASSLCII RRLYHIAKVR AVSHTRAEKM RVIIIDALIC 120
  121 VLFPLVYIAM QYIVQGHRFN ILENVGCYPA VFNTPVTYVV SYIWPVLIGM VSATYSVLAL 180
  181 IEFNRHRLQF SQFLHSNSTL SVSRYLRLMA LAMTEMCCTV PLGIFVIVLN CTSTPIEPWV 240
  241 SLKATHYWYS RVDQYPAVVW RSSHLVVVCN ELTRWLAPVS AMLFFAYFGF AQEARRNYAA 300
  301 AWAWACRALG LPERIATLPT TKSKGPGFAE KFAAKAKGLS SFNVKDFTSE FSSKAHDFTS 360
  361 KAKQYTLPRP MPQTPSSSGF SSSESTRFGS SVDGKELPSP TTKEFSSPIP IHLSGMQTLV 420
  421 SFDSNKDLPS PPAYDVEAQY GPYNIDNRVS YHIADAGVRA SYPMGVAYSS DSVHRRINPH 480
  481 ATFTSANNDT DEPTSPALPD TPSSCSSSAT FSTLQSRDFI VLPSTTDVTR DTGSLPIRRS 540
  541 PAGPPRLPSL SQLFGISSMR AEGRDVEAQV QDVATGTAAP TTTAPAPAST TIAPATTTAT 600
  601 APTTTANIQR GEPDVPTSPR THRASV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle