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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87299592, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPAAGFLSP RPFPRAAAPS APPAGPGPPA NASPRSEPEV LAGPRAPDPP GRLITDPLSG  60
   61 RTYTKGRLLG KGGFARCYEA TDTESGIAYA VKVIPQSRVA KPHQREKILN EIELHRDLQH 120
  121 RHIVRFSHHF EDADNIYIFL ELCSRKSLAH IWKARHTLLE PEVRYYLRQI LSGLKYLHQR 180
  181 GILHRDLKLG NFFITDNMEL KVGDFGLAAR LEPPEQRKKT ICGTPNYVAP EVLLRQGHGP 240
  241 EADVWSLGCV MYTLLCGSPP FETADLKETY RCIKQVHYTL PASLSLPARQ LLAAILRASP 300
  301 RDRPSIEQIL RHDFFTKGYT PDRLPVSSCV TVPDLTPPNP ARSLFAKVTK SLFGRKKNKN 360
  361 KNHSEDQDNV SCLVSGLMRT SIGHPDVRPE APVVSGQAPA SLVETAAEDS SPRGTLASSG 420
  421 DGFEEGLTVA TVVESALCAL RNCVAFMPPA EQNPAPLAQP EPLVWVSKWV DYSNKFGFGY 480
  481 QLSSRRVAVL FNDGTHMALS ANRKTVHYNP TSTKHFSFSM GSVPRALQPQ LGILRYFASY 540
  541 MEQHLMKGGD LPSVEEAEVP APPLLLQWVK TDQALLMLFS DGTVQVNFYG DHTKLILSGW 600
  601 EPLLVTFVAR NRSACTYLAS HLRQLGCSPD LRQRLRYALR LLRDQSPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle