YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41079029
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARAAPFYA RGFLSRNRNM YIYIGFLLFL DELVFSMSGS SSLSESGNQD SMDCLKATEK  60
   61 CNQDQKCSHR FRIMRQCLAG KDRNTMLANR DCQVALEVLQ EMALFDCRCK RGMKKEMQCL 120
  121 QSYWSINIGL TEGEDFYEPS PYEPMTPHRH SDAFRLASII SGMHSGTSKG QPHCTDPSRP 180
  181 CNPCLDATKA CNLNENCKRQ RSNYISTCTR AQTQGQQPSQ TQTQEGCNRK RCHKALRQFF 240
  241 ERVDTQYSYG LLFCACKDQA CAERRRQTIV PSCSYQDKNK PNCLQLRNTC RLDVHCRSRL 300
  301 ADFHTNCQMT PHSISSCLND DYQACLASYT RLIGADMTPN YLDSGHSNFT ISPWCTCKGS 360
  361 GNLEEECEKF LQDFRENTCL RNAIQAFGYG SLPKPDPQPT TGSVKPDLEP TATVAKTTME 420
  421 PGEDPCIISP CSNLNELDCY PSKDYNCESA EMKLSKPESP LNTRVEDPRN TSPGVKALTE 480
  481 AMMQSLLFAL VTLVM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle